The detailed information of tRNA gene sequence


Sequence ID>SRA1015281
Genome IDSRR023845.538096
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 228
End posion on genome 154
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atctgctaac
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGACGCCCTCTCACGGCGTAAGCACGAGTTCGATTC
TCGTAGGGGTCACCA
Downstream region at tRNA end position 
tttccgacta
Secondary structure (Cloverleaf model)
>SRA1015281	Glu	CTC
                   c      ACCA tttccgacta
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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