The detailed information of tRNA gene sequence


Sequence ID>SRA1015294
Genome IDSRR023846.2619
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 145
End posion on genome 71
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ccgggtttcc
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGTAGAGCACACCCTTCACACGGGTGGGGTCACAGGTTCAATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position 
gatcaacggc
Secondary structure (Cloverleaf model)
>SRA1015294	Val	CAC
                   c      ACCA gatcaacggc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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