The detailed information of tRNA gene sequence


Sequence ID>SRA1015307
Genome IDSRR023846.11628
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 91
End posion on genome 165
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caaccacgca
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGCGGCCCTTTCACGGCTGAAGCACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
tctcatcgcc
Secondary structure (Cloverleaf model)
>SRA1015307	Glu	TTC
                   a      ACCA tctcatcgcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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