The detailed information of tRNA gene sequence


Sequence ID>SRA1015311
Genome IDSRR023846.12616
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 258
End posion on genome 184
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gccctccggc
tRNA gene sequence 
GGGCGTGTAGCTCAGTGGTAGAGCACTGTGTTGACATCGCAGGGGTCGCAAGTTCAATCC
TTGCCACGCCCACCA
Downstream region at tRNA end position 
ttgaaagccc
Secondary structure (Cloverleaf model)
>SRA1015311	Val	GAC
                   c      ACCA ttgaaagccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          C T
                    T     C G T T C     A
        G A        A      | | | | |     A
      T     C T C G       G C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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