The detailed information of tRNA gene sequence


Sequence ID>SRA1015314
Genome IDSRR023846.13241
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 69
End posion on genome 145
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgcgtttgg
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
acgcccatca
Secondary structure (Cloverleaf model)
>SRA1015314	Met	CAT
                   g      ACCA acgcccatca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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