The detailed information of tRNA gene sequence


Sequence ID>SRA1015318
Genome IDSRR023846.14586
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 186
End posion on genome 110
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cggactccgt
tRNA gene sequence 
CGGGGAGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTCTTCCCGACCA
Downstream region at tRNA end position 
tttacgtgca
Secondary structure (Cloverleaf model)
>SRA1015318	Pro	CGG
                   t      ACCA tttacgtgca
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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