The detailed information of tRNA gene sequence


Sequence ID>SRA1015321
Genome IDSRR023846.16563
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 115
End posion on genome 204
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gatgcggtgc
tRNA gene sequence 
GGAAGAGTGTCCGAGTGGTTTAAGGAACTGGTCTTGAAAACCAGCGTAGGGGTAACTCTA
CCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
atgcttcgtt
Secondary structure (Cloverleaf model)
>SRA1015321	Ser	TGA
                   c      GCCA atgcttcgtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGTAGGGGTAACTCTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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