The detailed information of tRNA gene sequence


Sequence ID>SRA1015325
Genome IDSRR023846.18449
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 114
End posion on genome 38
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agcgaggcgc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCCAGGCCCACCA
Downstream region at tRNA end position 
ctttcgcgct
Secondary structure (Cloverleaf model)
>SRA1015325	Ile	GAT
                   c      ACCA ctttcgcgct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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