The detailed information of tRNA gene sequence


Sequence ID>SRA1015328
Genome IDSRR023846.20150
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 111
End posion on genome 35
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cactcagcgt
tRNA gene sequence 
CGGGGAGTGGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
ctttcccccg
Secondary structure (Cloverleaf model)
>SRA1015328	Pro	TGG
                   t      ACCA ctttcccccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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