The detailed information of tRNA gene sequence


Sequence ID>SRA1015351
Genome IDSRR023846.27900
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 219
End posion on genome 134
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gcgattcgcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTAATGGCAGCAGACTGTAAATCTGCCCTCTTACGAGTACGC
TGGTTCGAATCCAGCCCTCTCCACCA
Downstream region at tRNA end position 
gcgaagcgaa
Secondary structure (Cloverleaf model)
>SRA1015351	Tyr	GTA
                   c      ACCA gcgaagcgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    T       T G G C
      T A A        A     CCTCTTACGAGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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