The detailed information of tRNA gene sequence


Sequence ID>SRA1015383
Genome IDSRR023846.38182
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 38
End posion on genome 114
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagggcccga
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTTGTCCTGGGTTCAAG
TCCCAGACGCCCTACCC
Downstream region at tRNA end position 
gccccaccac
Secondary structure (Cloverleaf model)
>SRA1015383	Met	CAT
                   a      ACCC gccccaccac
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     G A C C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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