The detailed information of tRNA gene sequence


Sequence ID>SRA1015384
Genome IDSRR023846.38383
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 105
End posion on genome 13
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagcgcagt
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCACTCGTTTGCTAAATGAGCATACCCCTAATAAGG
GTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ctctttctat
Secondary structure (Cloverleaf model)
>SRA1015384	Ser	GCT
                   t      GCCA ctctttctat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACCCCTAATAAGGGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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