The detailed information of tRNA gene sequence


Sequence ID>SRA1015388
Genome IDSRR023846.39499
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 209
End posion on genome 117
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tgctgcagcc
tRNA gene sequence
GGAGACGTGGGTGAGTGGCTGAAACCAGCGGTTTGCTAAACCGCCGTACCGGGTTTACTG
GTACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position
aaatgcatgc
Secondary structure (Cloverleaf model)
>SRA1015388	Ser	GCT
                   c      GCCA aaatgcatgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACCGGGTTTACTGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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