The detailed information of tRNA gene sequence


Sequence ID>SRA1015392
Genome IDSRR023846.40535
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 131
End posion on genome 205
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acgccatgac
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGCGGCCCTTTCACGGCTGAAGCACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
cgccagcaat
Secondary structure (Cloverleaf model)
>SRA1015392	Glu	TTC
                   c      ACCA cgccagcaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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