The detailed information of tRNA gene sequence


Sequence ID>SRA1015393
Genome IDSRR023846.40843
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 241
End posion on genome 165
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cggtcgcagt
tRNA gene sequence 
CGGGGAGTGGCGCAGGCTGGTAGCGCACCTGGTTTGGGACCAGGGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
tcatgagata
Secondary structure (Cloverleaf model)
>SRA1015393	Pro	TGG
                   t      ACCA tcatgagata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      G G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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