The detailed information of tRNA gene sequence


Sequence ID>SRA1015398
Genome IDSRR023846.43692
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 209
End posion on genome 120
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgactggcct
tRNA gene sequence 
GGAAGAGTGTCCGAGTGGTTTAAGGAACTGGTCTTGAAAACCAGCGATGGGGTAACCCAT
CCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
ggtcagcagc
Secondary structure (Cloverleaf model)
>SRA1015398	Ser	TGA
                   t      GCCA ggtcagcagc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGATGGGGTAACCCATCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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