The detailed information of tRNA gene sequence


Sequence ID>SRA1015413
Genome IDSRR023846.49801
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 242
End posion on genome 153
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agtcctctgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCGCACTCGAAATGCGGCGTGCCCTCACGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttacctata
Secondary structure (Cloverleaf model)
>SRA1015413	Ser	CGA
                   c      GCCA tttacctata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTGCCCTCACGGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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