The detailed information of tRNA gene sequence


Sequence ID>SRA1015437
Genome IDSRR023846.56430
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 241
End posion on genome 167
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
nnnnnnntgT
tRNA gene sequence 
GCACCGTTGGTCTAATGGTTAGGATTCATCCCTTCCAAGGATGAGGTCGGGGTTCGATTC
CCCGACGGCGCAGCt
Downstream region at tRNA end position 
tttgcgagct
Secondary structure (Cloverleaf model)
>SRA1015437	Gly	TCC
                   T      AGCt tttgcgagct
                     G - C
                     C - G
                     A   C
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     G C C C C     A
      T A A        G      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          T     AGGT
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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