The detailed information of tRNA gene sequence


Sequence ID>SRA1015439
Genome IDSRR023846.58136
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 136
End posion on genome 212
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgcgagtgc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCCAGGCCCACCA
Downstream region at tRNA end position 
ctatggtgtg
Secondary structure (Cloverleaf model)
>SRA1015439	Ile	GAT
                   c      ACCA ctatggtgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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