The detailed information of tRNA gene sequence


Sequence ID>SRA1015442
Genome IDSRR023846.59733
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 145
End posion on genome 219
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aacgagtttc
tRNA gene sequence 
GGGCGCGTAGCTCAGTGGTAGAGCACACCCTTCACACGGGTGGGGTCGCTGGTTCAATCC
CAGCCGCGCCCACCA
Downstream region at tRNA end position 
gatttacgcc
Secondary structure (Cloverleaf model)
>SRA1015442	Val	CAC
                   c      ACCA gatttacgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     C G A C C     A
        G A        A      | | | | |     A
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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