The detailed information of tRNA gene sequence


Sequence ID>SRA1015446
Genome IDSRR023846.62571
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 256
End posion on genome 169
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
gcacccagaa
tRNA gene sequence
AGAGAGATGGCAGAGTGGTCGATTGCGGTGGTCTTGAAAACCACTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCTCTCTCTGCAA
Downstream region at tRNA end position
agagctagat
Secondary structure (Cloverleaf model)
>SRA1015446	Ser	TGA
                   a      GCAA agagctagat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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