The detailed information of tRNA gene sequence


Sequence ID>SRA1015459
Genome IDSRR023846.67337
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 265
End posion on genome 189
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGCACTGGTCTCGGGGTCCAGGGGTCGTAGGTTCGAA
TCCTATCGCCCCGACCC
Downstream region at tRNA end position 
attgccgatt
Secondary structure (Cloverleaf model)
>SRA1015459	Pro	CGG
                   n      ACCC attgccgatt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T   T
                  C       G
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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