The detailed information of tRNA gene sequence


Sequence ID>SRA1015460
Genome IDSRR023846.68247
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 235
End posion on genome 145
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnntatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGTCAAAAGCGT
ATCGAGGGTTCGAATCCCTCCCGCTCCGCCA
Downstream region at tRNA end position 
gttacccggg
Secondary structure (Cloverleaf model)
>SRA1015460	Ser	GGA
                   c      GCCA gttacccggg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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