The detailed information of tRNA gene sequence


Sequence ID>SRA1015483
Genome IDSRR023846.79777
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 189
End posion on genome 105
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cgtccgctcg
tRNA gene sequence 
GCGGGCGTGGCGGAACTGGTAGACGCGCTGGATTTAGGTTCCAGTATCGAAAGATGTGGG
GGTTCGACTCCCTTCGCCCGCACCA
Downstream region at tRNA end position 
gtgacgccgc
Secondary structure (Cloverleaf model)
>SRA1015483	Leu	TAG
                   g      ACCA gtgacgccgc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T T C C C     A
      C A A        G      + + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATCGAAAGATGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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