The detailed information of tRNA gene sequence


Sequence ID>SRA1015506
Genome IDSRR023846.88274
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 152
End posion on genome 243
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccaccgcca
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGCCGATCGGAAGCGCCTTGAAAGCGCTCGCTGGCAGCGATGTC
AGCCGCGGGTTCGAATCCCGCCCCCTCTGCCC
Downstream region at tRNA end position 
atcggacgcc
Secondary structure (Cloverleaf model)
>SRA1015506	Ser	TGA
                   a      GCCC atcggacgcc
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G C G G G     C
    G       + | | |                 T T
    C       T C G G
      C G A        A     CGCTGGCAGCGATGTCAGCC
                    A - T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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