The detailed information of tRNA gene sequence


Sequence ID>SRA1015520
Genome IDSRR023846.94131
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 129
End posion on genome 41
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctctccggc
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCTTGGAAAGCGGGTTGGGTTAACAGCCCT
CAGGGGTTCGAATCCCCTATCCTCCGCCG
Downstream region at tRNA end position 
ctccgctctg
Secondary structure (Cloverleaf model)
>SRA1015520	Ser	GGA
                   c      GCCG ctccgctctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTTAACAGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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