The detailed information of tRNA gene sequence


Sequence ID>SRA1015523
Genome IDSRR023846.95974
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 198
End posion on genome 123
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcggcgctgc
tRNA gene sequence 
AGGAGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGCCCACGGTTCGAGT
CCGTGCACTCCTGCCA
Downstream region at tRNA end position 
gtcacgccca
Secondary structure (Cloverleaf model)
>SRA1015523	Trp	CCA
                   c      GCCA gtcacgccca
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     G T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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