The detailed information of tRNA gene sequence


Sequence ID>SRA1015533
Genome IDSRR023846.101278
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 137
End posion on genome 63
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctcctcgtac
tRNA gene sequence 
GCGCCCTTCGTCTATCGGTTAGGACGTCAGATTTTCATTCTGAAAAGAGGGGTTCGACTC
CCCTAGGGCGTACCA
Downstream region at tRNA end position 
cttccccctt
Secondary structure (Cloverleaf model)
>SRA1015533	Glu	TTC
                   c      ACCA cttccccctt
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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