The detailed information of tRNA gene sequence


Sequence ID>SRA1015534
Genome IDSRR023846.101435
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 113
End posion on genome 37
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacaccctgg
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
aacacgacaa
Secondary structure (Cloverleaf model)
>SRA1015534	Met	CAT
                   g      ACCA aacacgacaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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