The detailed information of tRNA gene sequence


Sequence ID>SRA1015542
Genome IDSRR023846.104352
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 228
End posion on genome 154
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagcggcacc
tRNA gene sequence 
GGGCCTATAGCTCAATCGGTTAGAGCAGCTGACTCATAATCAGCAGGTCCTTGGTTCGAT
TCCAAGTGGGCCCACtt
Downstream region at tRNA end position 
aaaccgcctt
Secondary structure (Cloverleaf model)
>SRA1015542	Met	CAT
                   c      ACtt aaaccgcctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G A A C C     A
      T A A        A      | | | | |     G
    C       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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