The detailed information of tRNA gene sequence


Sequence ID>SRA1015543
Genome IDSRR023846.105114
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 164
End posion on genome 88
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aggcggcgag
tRNA gene sequence 
GGGCGGTTAGCTCAGCTGGTTAGAGCATCTCGTTTACACCGAGAGGGTCCGCGGTTCGAA
TCCGTGACCGCCCACCA
Downstream region at tRNA end position 
acgcgttttt
Secondary structure (Cloverleaf model)
>SRA1015543	Val	TAC
                   g      ACCA acgcgttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     G T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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