The detailed information of tRNA gene sequence


Sequence ID>SRA1015550
Genome IDSRR023846.108072
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 209
End posion on genome 134
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
accatgatca
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGGAGAGCAGTTGCTTTGCAAGCATCAGGTCGTCGGTTCGATC
CCGTCCGTCTCCACCA
Downstream region at tRNA end position 
ttcttttgtt
Secondary structure (Cloverleaf model)
>SRA1015550	Ala	TGC
                   a      ACCA ttcttttgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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