The detailed information of tRNA gene sequence


Sequence ID>SRA1015553
Genome IDSRR023846.109522
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 150
End posion on genome 231
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atatgttatc
tRNA gene sequence 
GTCAGTGTGCCCGAGCGGTCTAAGGGGGTAGACTCAAGTTCTACTGTGTTCGCACTCGTG
GGTTCAAATCCCACCGCTGACAgcc
Downstream region at tRNA end position 
tactccgtnn
Secondary structure (Cloverleaf model)
>SRA1015553	Leu	CAA
                   c      Agcc tactccgtnn
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    T       A G G G
      C T A        G     TGTGTTCGCACTC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  C       T
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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