The detailed information of tRNA gene sequence


Sequence ID>SRA1015564
Genome IDSRR023846.113495
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 114
End posion on genome 190
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgatcggctt
tRNA gene sequence 
GGGCCTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGACGTTCGAG
TCGTCCCAGGCCCACCA
Downstream region at tRNA end position 
ttcaccgcac
Secondary structure (Cloverleaf model)
>SRA1015564	Ile	GAT
                   t      ACCA ttcaccgcac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C C T G C     A
      G G A        A      | | | | |     G
    T       C T C G       G G A C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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