The detailed information of tRNA gene sequence


Sequence ID>SRA1015585
Genome IDSRR023846.121006
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 129
End posion on genome 54
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cacacagcgg
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTAGAGCATCTCCTTTACACGGAGGGGGTCGGCGGTTCGAGC
CCGTCATCACCCACCA
Downstream region at tRNA end position 
ttcatgatat
Secondary structure (Cloverleaf model)
>SRA1015585	Val	TAC
                   g      ACCA ttcatgatat
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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