The detailed information of tRNA gene sequence


Sequence ID>SRA1015590
Genome IDSRR023846.123680
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 213
End posion on genome 128
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position
gcggttcgct
tRNA gene sequence
GGAGAGGTGGCCGAGTGGTTAATGGCAGCAGACTGTAAATCTGCCCTCTTACGAGTACGC
TGGTTCGAATCCAGCCCTCTCCACCA
Downstream region at tRNA end position
gcgaagtcgg
Secondary structure (Cloverleaf model)
>SRA1015590	Tyr	GTA
                   t      ACCA gcgaagtcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    T       T G G C
      T A A        A     CCTCTTACGAGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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