The detailed information of tRNA gene sequence


Sequence ID>SRA1015601
Genome IDSRR023846.129168
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 163
End posion on genome 238
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaggttttgc
tRNA gene sequence 
GTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
cgatttcccg
Secondary structure (Cloverleaf model)
>SRA1015601	Glu	TTC
                   c      GCCA cgatttcccg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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