The detailed information of tRNA gene sequence


Sequence ID>SRA1015607
Genome IDSRR023846.131120
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 133
End posion on genome 227
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gtgttatggc
tRNA gene sequence 
GCCTCGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATGTGAAGATGTGAAGATGTGAA
GGTCGGGTCCCTGGTTCGATCCCGGGTCGCGGCACtt
Downstream region at tRNA end position 
ttacacgcgg
Secondary structure (Cloverleaf model)
>SRA1015607	Phe	GAA
                   c      ACtt ttacacgcgg
                     G - C
                     C - G
                     C - G
                     T   C
                     C - G
                     G - C
                     A - T          C T
                    T     G G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGATGTGAAGATGTGAAGGTCGGGTC
                    T - A
                    C - G
                    A - T
                    G   G
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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