The detailed information of tRNA gene sequence


Sequence ID>SRA1015627
Genome IDSRR023846.137187
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 36
End posion on genome 110
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcgactacac
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGACGCCCTCTCACGGCGTAAGCACGAGTTCGATTC
TCGTAGGGGTCACCA
Downstream region at tRNA end position 
gtccttcatc
Secondary structure (Cloverleaf model)
>SRA1015627	Glu	CTC
                   c      ACCA gtccttcatc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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