The detailed information of tRNA gene sequence


Sequence ID>SRA1015628
Genome IDSRR023846.137212
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 171
End posion on genome 241
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position
acgtatgcgg
tRNA gene sequence
GCGCCGTTGGTTTAGTGGTAAAATATCTCGTTGCCAACGAGATGCCCCGGGTTCGATTCC
CGGACGGCGCAttc
Downstream region at tRNA end position
tcttatgnnn
Secondary structure (Cloverleaf model)
>SRA1015628	Gly	GCC
                   g      Attc tcttatgnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     T T T G       C C G G G     C
      G     | | | +                 T T
      G     A A A T
        T A        A     TGCC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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