The detailed information of tRNA gene sequence


Sequence ID>SRA1015631
Genome IDSRR023846.138386
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 230
End posion on genome 155
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caacgggaat
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGTTCGCATGGCATGCGAAAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
tttcccccgg
Secondary structure (Cloverleaf model)
>SRA1015631	Ala	GGC
                   t      ACCA tttcccccgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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