The detailed information of tRNA gene sequence


Sequence ID>SRA1015634
Genome IDSRR023846.139560
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 221
End posion on genome 131
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agagcaatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGTCAAAAGCGT
ATCGAGGGTTCGAATCCCTCCCGCTCCGCCA
Downstream region at tRNA end position 
cccagtctcg
Secondary structure (Cloverleaf model)
>SRA1015634	Ser	GGA
                   c      GCCA cccagtctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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