The detailed information of tRNA gene sequence


Sequence ID>SRA1015650
Genome IDSRR023846.146038
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 125
End posion on genome 41
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position
cggcgaatgt
tRNA gene sequence
GCGGGTGTGGTGGAATTGGTAGACGCGCTGGACTCAAAATCCTGTTCCGAAAGGAGTGCC
GGTTCGACCCCGGCCACCCGCACCA
Downstream region at tRNA end position
ctcgatgacc
Secondary structure (Cloverleaf model)
>SRA1015650	Leu	CAA
                   t      ACCA ctcgatgacc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C C
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TTCCGAAAGGAGT
                    C - G
                    T   T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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