The detailed information of tRNA gene sequence


Sequence ID>SRA1015659
Genome IDSRR023846.148611
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 172
End posion on genome 248
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcgcctcggt
tRNA gene sequence 
CGGGGAGTGGCGCAGGCTGGTAGCGCACCTGGTTTGGGACCAGGGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
ttgcgttaan
Secondary structure (Cloverleaf model)
>SRA1015659	Pro	TGG
                   t      ACCA ttgcgttaan
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      G G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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