The detailed information of tRNA gene sequence


Sequence ID>SRA1015672
Genome IDSRR023846.152193
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 102
End posion on genome 26
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcgcctcggt
tRNA gene sequence 
CGGGGAGTGGCGCAGGCTGGTAGCGCACCTGGTTTGGGACCAGGGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
tcgcgttgaa
Secondary structure (Cloverleaf model)
>SRA1015672	Pro	TGG
                   t      ACCA tcgcgttgaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      G G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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