The detailed information of tRNA gene sequence


Sequence ID>SRA1015673
Genome IDSRR023846.153262
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 177
End posion on genome 105
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtgtcagtga
tRNA gene sequence 
GTCAGTGTCGTCTAGTGGTTAGGACGCGAGCTTCACACGCTCGAGATCGAGGGTTCGATC
CCCTCCTCTGATAtct
Downstream region at tRNA end position 
tctttgctct
Secondary structure (Cloverleaf model)
>SRA1015673	Val	CAC
                   a      Atct tctttgctct
                     G + T
                     T - A
                     C - G
                     A - T
                     G - C
                     T   T
                     G - C          C T
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T C T G       G A G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AGATC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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