The detailed information of tRNA gene sequence


Sequence ID>SRA1015682
Genome IDSRR023846.157732
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 185
End posion on genome 101
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position
ggcgttcatc
tRNA gene sequence
GCGGGCGTGGTGGAATTGGTAGACGCGCCGGACTCAAAATCCGGTTCCGCAAGGAGTGTC
GGTTCGATTCCGACCGCCCGCACCA
Downstream region at tRNA end position
tcgtcacgct
Secondary structure (Cloverleaf model)
>SRA1015682	Leu	CAA
                   c      ACCA tcgtcacgct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G T C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TTCCGCAAGGAGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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