The detailed information of tRNA gene sequence


Sequence ID>SRA1015691
Genome IDSRR023846.159032
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 145
End posion on genome 220
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cacctcgatc
tRNA gene sequence 
GGGGCTTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGACAAGCTCCACCA
Downstream region at tRNA end position 
tcatctgcct
Secondary structure (Cloverleaf model)
>SRA1015691	Ala	TGC
                   c      ACCA tcatctgcct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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