The detailed information of tRNA gene sequence


Sequence ID>SRA1015693
Genome IDSRR023846.160057
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 76
End posion on genome 152
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gccaccgcac
tRNA gene sequence 
AGGAGTGTAGCTCAGTTGGTTAGAGCGTCGGTCTCCAAAACCGAAGGCCCTCGGTTCGAA
TCCGAGCACTCCTGCCA
Downstream region at tRNA end position 
tttctcgcat
Secondary structure (Cloverleaf model)
>SRA1015693	Trp	CCA
                   c      GCCA tttctcgcat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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