The detailed information of tRNA gene sequence


Sequence ID>SRA1015699
Genome IDSRR023846.161217
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 47
End posion on genome 135
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agccccattc
tRNA gene sequence 
AGAGAGGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATGGCTCAAAAGGTC
ATCGTGGGTTCGAATCCCATCCTCTCTGCtg
Downstream region at tRNA end position 
ataaagcccc
Secondary structure (Cloverleaf model)
>SRA1015699	Ser	GGA
                   c      GCtg ataaagcccc
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TATGGCTCAAAAGGTCATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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